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Image Search Results
Journal: Cell
Article Title: Selective activation of PFKL suppresses the phagocytic oxidative burst
doi: 10.1016/j.cell.2021.07.004
Figure Lengend Snippet: KEY RESOURCES TABLE
Article Snippet:
Techniques: Virus, Cloning, Recombinant, CellTox Assay, Cytotoxicity Assay, Cytokine Assay, Isolation, Activity Assay, Screening Assay, Mass Spectrometry, Software
Journal: Journal of Biological Chemistry
Article Title: RNA Polymerase II C-terminal Heptarepeat Domain Ser-7 Phosphorylation Is Established in a Mediator-dependent Fashion
doi: 10.1074/jbc.m109.046565
Figure Lengend Snippet: FIGURE 3. CDK7 is a CTD Ser-7 kinase. A, shown is an immobilized template assay on the pGL2-MRG5 pro- moter template in the presence of the activator GAL-VP16. Mock-treated or CDK7-, CDK8-, and CDK9-depleted nuclear extracts (lanes 5–8) were used in the PIC formation reactions. Reactions were carried out under stand- ard in vitro transcription conditions in the presence of 1 M ATP. Lanes 1–4 show 20% of reaction input. B, shown is an immobilized template assay on the ML-promoter template in the presence of GAL-VP16 using mock-treated (Iso), core-TFIIH (p62), CDK7 (CDK7)- or CDK8-depleted (CDK8) Jurkat nuclear extract. Lanes 1–4 show 20% reaction input. TXN, in vitro transcription analysis. C, shown is an immobilized template assay on ML-promoter DNA templates under basal conditions at physiological salt concentrations. PICs were formed in the presence of the indicated amounts of ATPS, washed, and then analyzed by immunoblot. D, shown is an immobilized template assay on the ML-promoter DNA template using mock-treated (Iso), Mediator-depleted (MED), and CDK7-depleted (CDK7) 0.5 M P11 fractions together with GAL4-VP16, recombinant yeast TBP, Toa, and recombinant human TFIIB as indicated. In lane 6 a high salt-washed MED15-IP was added. PIC forma- tion was carried out under physiological conditions in the presence of 1 M ATP and 10 M ATPS. NEX, nuclear extract.E,immobilizedtemplateassayonML-promoterDNAtemplatesusingeitherJurkatnuclearextract(lane 1) or a recombinant transcription system consisting of yeast TBP, Toa, human TFIIB, TFIIE, and TFIIF) in combi- nation with a high salt-washed Mediator-IP (which also provides RNAPII; lanes 2 and 3) is shown. In lane 3 a stringently washed CDK7 IP was also added to the PIC formation reactions. PIC formation in D and E was carried out under physiological conditions in the presence of 1 M ATP and 10 M ATPS.
Article Snippet: Jurkat nuclear extracts were immunodepleted using antiRNAPII (1C7), MED15 (1H7), and MED25 (VC1) rat monoclonal antibodies, anti-TBP,
Techniques: In Vitro, Western Blot, Recombinant